26．Shimogonya Y, Ruan J, Kato T, Ishikawa T, Namba K, Wu LF, Nishiyama M. Helical swimming motion driven by coordinated rotation of flagellar apparatus in marine bacterial cells. Journal of Biomechanical Science and Engineering, #24-00284, 2024/10/18, doi: 10.1299/jbse.24-00284.
25．Shimogonya Y, Fukuda S; CFD ABO Study Group. Role of disturbed wall shear stress in the development of cerebral aneurysms. Journal of Biomechanics, 176, #112355, 2024/10/1, doi: 10.1016/j.jbiomech.2024.112355.
24．Yamamoto K, Shimogonya Y, Maeno R, Kawabe K, Ando J. Endothelial cells differentially sense laminar and disturbed flows by altering the lipid order of their plasma and mitochondrial membranes. American Journal of Physiology-Cell Physiology, 325(6), C1532-C1544, 2023/12/1, doi: 10.1152/ajpcell.00393.2023.
23．Kanno K, Akabane H, Shimogonya Y, Kataoka N. Response of human endothelial cells to the vortex flow in an immediately expanding flow chamber. Journal of Biomechanical Science and Engineering, 17(3), #22-00080, 2022/7/15, doi: 10.1299/jbse.22-00080.
22．Fukuda S, Shimogonya Y, Yonemoto N, Fukuda M, Watanabe A, Fujiwara K, Enomoto R, Hasegawa K, Yasoda A, Tsukahara T; NHO Carotid CFD Study Group. Hemodynamic risk factors for the development of carotid stenosis in patients with unilateral carotid stenosis. World Neurosurgery, 160, e353-e371, 2022/1/11, doi: 10.1016/j.wneu.2022.01.019.
21．Fukuda S, Shimogonya Y, Nakamura M, Yamada T, Suzuki K, Yamamoto Y, Kanou K, Okada N, Pan F, Okudaira T, Kuwahara S. (Fukuda S, Shimogonya Y, and Nakamura M contributed equally to this work.) Review on the formation and growth of cerebral aneurysms. Journal of Biorheology, 33(2), 43-52, 2019/12/28, doi: 10.17106/jbr.33.43.
20．Fukuda S, Shimogonya Y, Yonemoto N; CFD ABO Study Group. (Fukuda S and Shimogonya Y contributed equally to this work.) Differences in cerebral aneurysm rupture rate according to arterial anatomies depend on the hemodynamic environment. AJNR American Journal of Neuroradiology, 40(5), 834-839, 2019/4/11, doi: 10.3174/ajnr.A6030.
19．Yang J, Shimogonya Y, Ishikawa T. Bacterial detachment from a wall with a bump line. Physical Review E, 99, #023104, 2019/2/8, doi: 10.1103/PhysRevE.99.023104.
18．Valen-Sendstad K, Bergersen AW, Shimogonya Y, Goubergrits L, Bruening J, Pallares J, Cito S, Piskin S, Pekkan K, Geers AJ, Larrabide I, Rapaka S, Mihalef V, Fu W, Qiao A, Jain K, Roller S, Mardal KA, Kamakoti R, Spirka T, Ashton N, Revell A, Aristokleous N, Houston JG, Tsuji M, Ishida F, Menon PG, Browne LD, Broderick S, Shojima M, Koizumi S, Barbour M, Aliseda A, Morales HG, Lefèvre T, Hodis S, Al-Smadi YM, Tran JS, Marsden AL, Vaippummadhom S, Einstein GA, Brown AG, Debus K, Niizuma K, Rashad S, Sugiyama SI, Owais Khan M, Updegrove AR, Shadden SC, Cornelissen BMW, Majoie CBLM, Berg P, Saalfield S, Kono K, Steinman DA. Real-world variability in the prediction of intracranial aneurysm wall shear stress: the 2015 international aneurysm CFD challenge. Cardiovascular Engineering and Technology, 9(4), 544-564, 2018/9/10, doi: 10.1007/s13239-018-00374-2.
17．Yang J, Shimogonya Y, Ishikawa T. What causes the spatial heterogeneity of bacterial flora in the intestine of zebrafish larvae? Journal of Theoretical Biology, 446, 101-109, 2018/6/7, doi: 10.1016/j.jtbi.2018.03.007.
16．Yang J, Shimogonya Y, Ishikawa T. Mixing and pumping functions of the intestine of zebrafish larvae. Journal of Theoretical Biology, 419, 152-158, 2017/4/21, doi: 10.1016/j.jtbi.2017.02.004.
15．Saadatmand M, Shimogonya Y, Yamaguchi T, Ishikawa T. Enhancing cell-free layer thickness by bypass channels in a wall. Journal of Biomechanics, 49(11), 2299-2305, 2016/7/26, doi: 10.1016/j.jbiomech.2015.11.032.
14．Imai Y, Omori T, Shimogonya Y, Yamaguchi T, Ishikawa T. Numerical methods for simulating blood flow at macro, micro, and multi scales. Journal of Biomechanics, 49(11), 2221-2228, 2016/7/26, doi: 10.1016/j.jbiomech.2015.11.047.
13．Shimogonya Y, Fukuda S. Computational and experimental studies into the hemodynamics of cerebral aneurysms. Journal of Biomechanical Science and Engineering, 11(1), #15-00488, 2016/6/6, doi: 10.1299/jbse.15-00488.
12．Aoki T, Yamamoto K, Fukuda M, Shimogonya Y, Fukuda S, Narumiya S. Sustained expression of MCP-1 by low wall shear stress loading concomitant with turbulent flow on endothelial cells of intracranial aneurysm. Acta Neuropathologica Communications, 4, #48, 2016/5/9, doi: 10.1186/s40478-016-0318-3.
11．Shimogonya Y, Sawano Y, Wakebe H, Inoue Y, Ishijima A, Ishikawa T. Torque-induced precession of bacterial flagella. Scientific Reports, 5, #18488, 2015/12/22, doi: 10.1038/srep18488.
10．福田 俊一, 下權谷 祐児. 脳動脈瘤の形成・増大・破裂における血行力学的因子の役割について –計算流体力学(CFD)解析と動物モデルによる実験を相補的に用いた検討–. 脳神経外科ジャーナル, 23(8), 661-666, 2014/8/25, doi: 10.7887/jcns.23.661.
9．伊藤 和宏, 熊丸 博滋, 下權谷 祐児. ベンチレータの有無による自動車用ブレーキディスク周りの速度場の変化. 実験力学, 13(1), 27-34, 2013/3/28, doi: 10.11395/jjsem.13.27.
8．Shimogonya Y, Kumamaru H, Itoh K. Sensitivity of the gradient oscillatory number to flow input waveform shapes. Journal of Biomechanics, 45(6), 985-989, 2012/4/5, doi: 10.1016/j.jbiomech.2012.01.008.
7．Itoh K, Iwata Y, Kumamaru H, Shimogonya Y. Evaluation of streamwise waveform on a high-speed water jet by detecting trajectories of two refracted laser beams. International Journal of Optics, 2011, #608139, 2011/4/20, doi: 10.1155/2011/608139.
6．熊丸 博滋, 下舞 高志, 瓶子 直矢, 伊藤 和宏, 下權谷 祐児. 勾配磁場による水-磁性微粒子分散流れからの磁性微粒子の分離. 混相流, 24(3), 297-304, 2010/9/15, doi: 10.3811/jjmf.24.297.
5．Shimogonya Y, Ishikawa T, Imai Y, Matsuki N, Yamaguchi T. A realistic simulation of saccular cerebral aneurysm formation: focusing on a novel haemodynamic index, the gradient oscillatory number. International Journal of Computational Fluid Dynamics, 23(8), 583-593, 2009/11/2, doi: 10.1080/10618560902953575.
4．Shimogonya Y, Ishikawa T, Imai Y, Matsuki N, Yamaguchi T. Can temporal fluctuation in spatial wall shear stress gradient initiate a cerebral aneurysm? A proposed novel hemodynamic index, the gradient oscillatory number (GON). Journal of Biomechanics, 42(4), 550-554, 2009/3/11, doi: 10.1016/j.jbiomech.2008.10.006.
3．Shimogonya Y, Ishikawa T, Imai Y, Mori D, Matsuki N, Yamaguchi T. Formation of saccular cerebral aneurysms may require proliferation of the arterial wall: computational investigation. Journal of Biomechanical Science and Engineering, 3(3), 431-442, 2008/9/30, doi: 10.1299/jbse.3.431.
2．Yamaguchi T, Kondo H, Sato K, Shimogonya Y, Hayasaka T, Yano K, Mori D, Imai Y, Tsubota K, Ishikawa T. Computational biomechanics of arterial diseases from micro to macro scales. Journal of Applied Mechanics, 11, 3-12, 2008/8/25, doi: 10.2208/journalam.11.3.
1．Matsuyama S, Shimogonya Y, Ohnishi N, Sasoh A, Sawada K. Multiband radiation model for simulation of Galileo probe entry flowfield. Journal of Thermophysics and Heat Transfer, 20(3), 611-614, 2006/7, doi: 10.2514/1.16432.
